Gene detail

Detailed information of Ppa0G208400 in Paragorgia papillata

Genomic Location: Contig00314:2095543...2098644
NR annotation: CAB3987465.1, cytochrome c oxidase 20 homolog [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D7J4	Cytochrome c oxidase assembly protein COX20, mitochondrial OS=Mus musculus OX=10090 GN=Cox20 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009955 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12597 all species →	Cox20	Cytochrome c oxidase assembly protein COX20	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022533 all species →	Family	Cox20	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31586 all species →	CYTOCHROME C OXIDASE PROTEIN 20	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0033617 all species →	Biological Process	mitochondrial cytochrome c oxidase assembly	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18184	COX20; cytochrome c oxidase assembly protein subunit 20	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.