Genomic Location: Contig00314:2434636...2456126
NR annotation: CAB3981468.1, Fanconi anemia group M -like [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families
| CDS |
| Ppa0G208720 |
| Transcript |
| Ppa0G208720 |
| Protein |
| Ppa0G208720 |
| UniProt accession | Description |
|---|---|
| Q8IYD8 | Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2 |
| Q8BGE5 | Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3 |
| A0A1D5PRR9 | Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003347 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00271 all species → | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF02732 all species → | ERCC4 | ERCC4 domain | Domain | Interproscan |
| PF16783 all species → | FANCM-MHF_bd | FANCM to MHF binding domain | Domain | Interproscan |
| PF04851 all species → | ResIII | Type III restriction enzyme, res subunit | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 all species → | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR006166 all species → | Domain | ERCC4 domain | Interproscan |
| IPR014001 all species → | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR047418 all species → | Domain | Fanconi anemia group M protein, XPF-like nuclease domain | Interproscan |
| IPR039686 all species → | Domain | FANCM/Mph1-like, insert domain | Interproscan |
| IPR031879 all species → | Domain | Fanconi anemia group M protein, MHF binding domain | Interproscan |
| IPR010994 all species → | Homologous_superfamily | RuvA domain 2-like | Interproscan |
| IPR044749 all species → | Domain | FANCM, DEAH-box helicase domain | Interproscan |
| IPR006935 all species → | Domain | Helicase/UvrB, N-terminal | Interproscan |
| IPR011335 all species → | Homologous_superfamily | Restriction endonuclease type II-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14025 all species → | FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0004518 all species → | Molecular Function | nuclease activity | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0043138 all species → | Molecular Function | 3'-5' DNA helicase activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0000400 all species → | Molecular Function | four-way junction DNA binding | Interproscan |
| GO:0009378 all species → | Molecular Function | four-way junction helicase activity | Interproscan |
| GO:0036297 all species → | Biological Process | interstrand cross-link repair | Interproscan |
| GO:0045003 all species → | Biological Process | double-strand break repair via synthesis-dependent strand annealing | Interproscan |
| GO:0016787 all species → | Molecular Function | hydrolase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10896 | FANCM; fanconi anemia group M protein | - | DNA repair and recombination proteins | ko03400 | deepkoala |