Detailed information of Ppa0G211740 in Paragorgia papillata

Genomic Location: Contig00316:352877...357265
NR annotation: SMN01977.1, hypothetical protein SPONN_284 [uncultured Candidatus Thioglobus sp.]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004699 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species
Ubiquitin familyDUB|ULP|ULP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02902
all species →		Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF00628
all species →		PHDPHD-fingerDomainInterproscan
PF00872
all species →		Transposase_mutTransposase, Mutator familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR003653
all species →		DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR001207
all species →		FamilyTransposase, mutator typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34718
all species →		PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0004803
all species →		Molecular Functiontransposase activityInterproscan
GO:0006313
all species →		Biological ProcessDNA transpositionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G211740.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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