Gene detail

Detailed information of Ppa0G211740 in Paragorgia papillata

Genomic Location: Contig00316:352877...357265
NR annotation: SMN01977.1, hypothetical protein SPONN_284 [uncultured Candidatus Thioglobus sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD
Ubiquitin Family	DUB\|ULP\|ULP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan
PF00628	PHD	PHD-finger	Domain	Interproscan
PF00872	Transposase_mut	Transposase, Mutator family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR001207	Family	Transposase, mutator type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34718	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004803	Molecular Function	transposase activity	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan