Gene detail

Detailed information of Ppa0G212470 in Paragorgia papillata

Genomic Location: Contig00316:1844179...1846159
NR annotation: CAB3993305.1, coiled-coil domain-containing 103-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RJU3	Dynein axonemal assembly factor 19 OS=Xenopus tropicalis OX=8364 GN=dnaaf19 PE=2 SV=2
Q6DGB6	Dynein axonemal assembly factor 19 OS=Danio rerio OX=7955 GN=dnaaf19 PE=1 SV=1
Q9D9P2	Dynein axonemal assembly factor 19 OS=Mus musculus OX=10090 GN=Dnaaf19 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008934 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15867 all species →	Dynein_attach_N	Dynein attachment factor N-terminus	Family	Interproscan
PF13877 all species →	RPAP3_C	Potential Monad-binding region of RPAP3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042422 all species →	Family	Coiled-coil domain-containing protein 103	Interproscan
IPR031733 all species →	Domain	Dynein attachment factor, N-terminal	Interproscan
IPR025986 all species →	Domain	RNA-polymerase II-associated protein 3-like, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28572 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 103	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003351 all species →	Biological Process	epithelial cilium movement involved in extracellular fluid movement	Interproscan
GO:0007368 all species →	Biological Process	determination of left/right symmetry	Interproscan
GO:0036157 all species →	Cellular Component	outer dynein arm	Interproscan
GO:0036159 all species →	Biological Process	inner dynein arm assembly	Interproscan
GO:0070286 all species →	Biological Process	axonemal dynein complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23731	CCDC103; coiled-coil domain-containing protein 103	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.