Genomic Location: Contig00396:5225802...5263593
NR annotation: XP_046864501.1, protein ZGRF1-like [Xenia sp. Carnegie-2017]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G248380 |
| Transcript |
| Ppa0G248380 |
| Protein |
| Ppa0G248380 |
| UniProt accession | Description |
|---|---|
| Q0VGT4 | 5'-3' DNA helicase ZGRF1 OS=Mus musculus OX=10090 GN=Zgrf1 PE=1 SV=2 |
| Q86YA3 | 5'-3' DNA helicase ZGRF1 OS=Homo sapiens OX=9606 GN=ZGRF1 PE=1 SV=3 |
| Q9HEH1 | Regulator of nonsense transcripts 1 homolog OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=2E4.130 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003029 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10382 all species → | DUF2439 | Protein of unknown function (DUF2439) | Family | Interproscan |
| PF06839 all species → | zf-GRF | GRF zinc finger | Domain | Interproscan |
| PF13087 all species → | AAA_12 | AAA domain | Domain | Interproscan |
| PF13086 all species → | AAA_11 | AAA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018838 all species → | Domain | 5'-3' DNA helicase ZGRF1-like, N-terminal domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR045055 all species → | Family | DNA2/NAM7-like helicase | Interproscan |
| IPR047187 all species → | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| IPR010666 all species → | Domain | Zinc finger, GRF-type | Interproscan |
| IPR041679 all species → | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| IPR041677 all species → | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10887 all species → | DNA2/NAM7 HELICASE FAMILY | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000184 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0003724 all species → | Molecular Function | RNA helicase activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0004386 all species → | Molecular Function | helicase activity | Interproscan |
Ppa0G248380.
