Detailed information of Ppa0G251170 in Paragorgia papillata

Genomic Location: Contig00396:9862538...9866636
NR annotation: XP_046859364.1, malignant fibrous histiocytoma-amplified sequence 1 homolog [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q58DS5Ras-related protein Rab-13 OS=Bos taurus OX=9913 GN=RAB13 PE=1 SV=1
F1PTE3Ras-related protein Rab-13 OS=Canis lupus familiaris OX=9615 GN=RAB13 PE=1 SV=2
Q9DD03Ras-related protein Rab-13 OS=Mus musculus OX=10090 GN=Rab13 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050715FamilyLeucine-rich repeat and signaling effector domain-containing proteinInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45752LEUCINE-RICH REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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