Detailed information of Ppa0G252740 in Paragorgia papillata

Genomic Location: Contig00402:1453126...1469706
NR annotation: CAB3990875.1, Nucleo TPR [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P12270Nucleoprotein TPR OS=Homo sapiens OX=9606 GN=TPR PE=1 SV=3
F1MA98Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1
F6ZDS4Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002126 (this species only)
Ubiquitin familyDUB|OTU|OTU · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for Ppa0G252740. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR047273
all species →		DomainVertnin-like, ovarian tumor domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18898
all species →		NUCLEOPROTEIN TPR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005643
all species →		Cellular Componentnuclear poreInterproscan
GO:0006406
all species →		Biological ProcessmRNA export from nucleusInterproscan
GO:0017056
all species →		Molecular Functionstructural constituent of nuclear poreInterproscan
GO:1901673
all species →		Biological Processregulation of mitotic spindle assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06679MAD1; mitotic spindle assembly checkpoint protein MAD1-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP