Gene detail

Detailed information of Ppa0G257490 in Paragorgia papillata

Genomic Location: Contig00406:2307366...2333086
NR annotation: XP_028397932.1, calponin homology domain-containing protein DDB_G0272472-like [Dendronephthya gigantea]
Species abbreviation PPAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G257490

ATGACAATGCAAGCAGACAAGAGAAAAACATTAAACCTTGAGTTACAAGTTATTGGATATAAAAGTCAGCTTCATAATAAAAGAAAGACTACAGCTAAAACTGTCTGTAATAATGGAGAAGTTCAAAGTGTTAACAAGTCAGCCAAAACAAGAACCAAACAGCAGCAACTTACTCAAAGGAAACCAAAAAGCAATGAAAAAACAGCCATTGTACCAAAAGCCAAGAAATCTCCTAGGATAGCTGCTCGTTTCGATGGAAGATCATCTGACAAAGACAGAGAAAGTCTTACAACAAAAAATAAACATGGAACCATGTTGGGAAAACCCAAGAAAGTTGATCCTTCTATTCCAGCCAATGAAAATGCTGCTTTTGTAACAAAAAATGATTTAGCAAGCTTATTGGAAGTACTGACTGGTAGTGGTAGTAATGACATATCAACATTACTTATGAAGACAAACAAGGCTGCATTAGGTACTATTCGGATTCATCGGAATAACCATAGAGATCATATAAATACTAGAGGGGGCATTGGCGGGAAAATTTGGTTTCAATCTGTAACCGAGCCTGTTACATCTACAACGCAGACAGCTAGATCTACATCTCAAGAGAATACCGTATCTAATACGTCCGTGGAGTTTTCAAAACCCACTGCGATGAGAAGTTCATTTGCTGTTGGTGCACCAGGGATGGTAATAAATGATCCATATGACGATAAAGCTGCAAGACATCAACAGTGGATCAAAGACTTAGGGCAGCAAATCCAAGAAAAGAAAGAAAGAGAACAGTTAATAAATAAGACTCAGTCAAATGATTTAATTTCCCAGACTGGAACTAAAAGAAATGTAGTGATTACAGAGAAAACAAAAACTGATAATTCTCCCGTGAAAACTGTTGGAGAAACCTCTCATCAAGAAGAACAAACAGAAAGTGGTGGACATGGGAGAGGCCGTGGTCTAATGAGCATGATGGTGTCAACGGACGAAGCTGATAAACAAAGGCGAAAGATTTTTGAACATCAAAAAGCTATTCAGCTTCAAGTTGAAGATCGAAGAAGACAAAAAATGGAAGAACGCGAACGTCGTCTCAGAGAAGAAGCGTTGGAAGACGATCGACTGGCTAAAGAAAGAAAAGAACTTCAAAAGCAATTTGAAGAAGAATTGAGAAAGAACAGAGAGAAAGAGGAGCAAGCAAAGCATCGTACACATCTTTTGCAAGAAGGCATTTCAAAAGCTTACGAGTCAGCACAACAGTCAAAACGCGAGAAGAGAAGAAATCGCTTGCAAATTACAGCTCCAGAAGAAGGCAAGTCATTACGCTTATCATATTTCAATGGTAAAAACAGTCATGAACAACAAGATCATAATCAAAACATTCCATTGTCAGATAACCCTCAGAATCAGTCAATTAATTTTATTCATGGCAGTTCTAGTAAAACAAGTATGGTTCCTCCTCTTCACTTAAGTCGGTCTTATTCACCTTTGGACTCAAAACTTAATCAGAACATTTCATCACGATTATCTGACTCCACTTTGAAAGTTAATCGAAATTCGTTATCAGTGCGTGACGTAAAAACATCGTATTCCGAGCCTGGCTCTCGAAGTCGGTCACACGACATGATACATAAGTGGGCAGAAGAAGATGTTGGCAATTTGATTGATGACAAAGACCACGTTTACAATGAAACCTCTGTCATGCAGTTTTCTTCTGGTGAATTTCTAATACCTTTCCATAGAACTGCAAGTGCAACGTTAATGACTGAGAGTTCATCTGTGCCAGAAAATGGCGAGAGTGATGATATTTCTGGACCTATTGGCCCAGGTTATAATCAGGATCGAGATCGTAAACATGTTAAGAAACGTCGTCCAATTCCTGAAGTACAACCAACTCGAGCTTCACGTCTGCGAGAGAAAGTTAGAACGAGTGGCGAGGTGAAGAATTCCACATTTCCCGCTCGACGCCTTGAGCAGACAGCAGAAGCAGCTCAGAAAACTGTTCAAAGACACAAACTTAAACAAAGTATAGCAACAAGTGAAGCAACATCACGGCATACTATTGATGGATCTAGAAGTACACTTAAAGAAAAACAATCGTTAAGCGAAGAAAATAAAATGAATACTACTCCAACGGTATGTAAAATTATGTTGCAGAACTTAACAATATTACATGCACGTTATGGTTGCTCAATTTTGGGGCCCACATAA

Transcript

Ppa0G257490

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004632 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15236 all species →	CCDC66	Coiled-coil domain-containing protein 66	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040467 all species →	Domain	CCDC66 domain	Interproscan
IPR039183 all species →	Family	Coiled-coil domain-containing protein 66	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22736 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Ppa0G257490.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.