Gene detail

Detailed information of Ppa0G258280 in Paragorgia papillata

Genomic Location: Contig00406:3617967...3634799
NR annotation: XP_028397864.1, dnaJ homolog subfamily A member 3, mitochondrial-like isoform X1 [Dendronephthya gigantea]
Species abbreviation PPAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99M87	DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus OX=10090 GN=Dnaja3 PE=1 SV=1
Q96EY1	DnaJ homolog subfamily A member 3, mitochondrial OS=Homo sapiens OX=9606 GN=DNAJA3 PE=1 SV=2
Q27237	DnaJ homolog l(2)tid, mitochondrial OS=Drosophila melanogaster OX=7227 GN=l(2)tid PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003257 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan
PF00684 all species →	DnaJ_CXXCXGXG	DnaJ central domain	Domain	Interproscan
PF01556 all species →	DnaJ_C	DnaJ C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001305 all species →	Domain	Heat shock protein DnaJ, cysteine-rich domain	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR008971 all species →	Homologous_superfamily	HSP40/DnaJ peptide-binding	Interproscan
IPR018253 all species →	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR036410 all species →	Homologous_superfamily	Heat shock protein DnaJ, cysteine-rich domain superfamily	Interproscan
IPR051938 all species →	Family	Apoptosis and cytoskeleton modulation protein	Interproscan
IPR012724 all species →	Family	Chaperone DnaJ	Interproscan
IPR002939 all species →	Domain	Chaperone DnaJ, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44145 all species →	DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031072 all species →	Molecular Function	heat shock protein binding	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0007005 all species →	Biological Process	mitochondrion organization	Interproscan
GO:0043066 all species →	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0009408 all species →	Biological Process	response to heat	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03686	dnaJ; molecular chaperone DnaJ	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.