Detailed information of Ppa0G267180 in Paragorgia papillata

Genomic Location: Contig00418:647517...654654
NR annotation: CAB4017944.1, serine threonine- phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66LE6Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Homo sapiens OX=9606 GN=PPP2R2D PE=1 SV=1
Q925E7Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Mus musculus OX=10090 GN=Ppp2r2d PE=1 SV=1
Q6DIY3Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Xenopus tropicalis OX=8364 GN=ppp2r2d PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006479 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for Ppa0G267180. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR000009
all species →		FamilyProtein phosphatase 2A regulatory subunit PR55Interproscan
IPR018067
all species →		Conserved_siteProtein phosphatase 2A regulatory subunit PR55, conserved siteInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11871
all species →		PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000159
all species →		Cellular Componentprotein phosphatase type 2A complexInterproscan
GO:0019888
all species →		Molecular Functionprotein phosphatase regulator activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04354PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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