Gene detail

Detailed information of Ppa0G267760 in Paragorgia papillata

Genomic Location: Contig00419:221927...222449
NR annotation: CAB4036601.1, 50S ribosomal L35 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O66982	Large ribosomal subunit protein bL35 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rpmI PE=3 SV=1
A6LTR4	Large ribosomal subunit protein bL35 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=rpmI PE=3 SV=1
B2TS60	Large ribosomal subunit protein bL35 OS=Clostridium botulinum (strain Eklund 17B / Type B) OX=935198 GN=rpmI PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010221 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01632 all species →	Ribosomal_L35p	Ribosomal protein L35	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021137 all species →	Family	Large ribosomal subunit protein bL35-like	Interproscan
IPR018265 all species →	Conserved_site	Large ribosomal subunit protein bL35, conserved site	Interproscan
IPR001706 all species →	Family	Large ribosomal subunit protein bL35	Interproscan
IPR037229 all species →	Homologous_superfamily	Large ribosomal subunit protein bL35 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33343 all species →	54S RIBOSOMAL PROTEIN BL35M	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02916	RP-L35, MRPL35, rpmI; large subunit ribosomal protein L35	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.