Gene detail

Detailed information of Ppa0G269140 in Paragorgia papillata

Genomic Location: Contig00422:36024...42971
NR annotation: XP_028411436.1, sorting and assembly machinery component 50 homolog A-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q803G5	Sorting and assembly machinery component 50 homolog A OS=Danio rerio OX=7955 GN=samm50a PE=2 SV=1
Q2HJ55	Sorting and assembly machinery component 50 homolog OS=Bos taurus OX=9913 GN=SAMM50 PE=2 SV=1
Q6PA35	Sorting and assembly machinery component 50 homolog B OS=Xenopus laevis OX=8355 GN=samm50-b PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01103	Omp85	Omp85 superfamily domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000184	Domain	Bacterial surface antigen (D15)	Interproscan
IPR039910	Family	Surface antigen D15-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12815	SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0019867	Cellular Component	outer membrane	Interproscan
GO:0033108	Biological Process	mitochondrial respiratory chain complex assembly	Interproscan
GO:0045040	Biological Process	protein insertion into mitochondrial outer membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07277	SAM50, TOB55, bamA; outer membrane protein insertion porin family	-	Transporters	ko02000	deepkoala