Gene detail

Detailed information of Ppa0G269470 in Paragorgia papillata

Genomic Location: Contig00422:305683...307047
NR annotation: XP_028416018.1, succinate dehydrogenase assembly factor 2, mitochondrial-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B0XK69	Succinate dehydrogenase assembly factor 2, mitochondrial OS=Culex quinquefasciatus OX=7176 GN=CPIJ019830 PE=3 SV=1
A3KP74	Succinate dehydrogenase assembly factor 2, mitochondrial OS=Danio rerio OX=7955 GN=sdhaf2 PE=2 SV=1
B3MGU5	Succinate dehydrogenase assembly factor 2-B, mitochondrial OS=Drosophila ananassae OX=7217 GN=GF11203 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008262 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03937 all species →	Sdh5	Flavinator of succinate dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036714 all species →	Homologous_superfamily	Flavinator of succinate dehydrogenase superfamily	Interproscan
IPR028882 all species →	Family	Succinate dehydrogenase assembly factor 2, mitochondrial	Interproscan
IPR005631 all species →	Family	Flavinator of succinate dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12469 all species →	PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0018293 all species →	Biological Process	protein-FAD linkage	Interproscan
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006121 all species →	Biological Process	mitochondrial electron transport, succinate to ubiquinone	Interproscan
GO:0034553 all species →	Biological Process	mitochondrial respiratory chain complex II assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18168	SDHAF2, SDH5; succinate dehydrogenase assembly factor 2	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.