Detailed information of Ppa0G270310 in Paragorgia papillata

Genomic Location: Contig00422:1229813...1244139
NR annotation: CAB4026443.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DGN6Protein SPT2 homolog OS=Danio rerio OX=7955 GN=spty2d1 PE=2 SV=2
Q6NU13Protein SPT2 homolog OS=Xenopus laevis OX=8355 GN=spty2d1 PE=2 SV=1
Q8IMP6Protein SPT2 homolog OS=Drosophila melanogaster OX=7227 GN=CG5815 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006405 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08243
all species →		SPT2SPT2 chromatin proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013256
all species →		FamilyChromatin SPT2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22691
all species →		YEAST SPT2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0006334
all species →		Biological Processnucleosome assemblyInterproscan
GO:0006360
all species →		Biological Processtranscription by RNA polymerase IInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G270310.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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