Detailed information of Ppa0G274400 in Paragorgia papillata

Genomic Location: Contig00424:4064962...4073380
NR annotation: CAB3978845.1, Trafficking particle complex subunit 4 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ES56Trafficking protein particle complex subunit 4 OS=Mus musculus OX=10090 GN=Trappc4 PE=1 SV=1
Q9Y296Trafficking protein particle complex subunit 4 OS=Homo sapiens OX=9606 GN=TRAPPC4 PE=1 SV=1
Q5R9J9Trafficking protein particle complex subunit 4 OS=Pongo abelii OX=9601 GN=TRAPPC4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007980 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04099
all species →		SybindinSybindin-like family FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011012
all species →		Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR007233
all species →		FamilyTrafficking protein particle complex subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23249
all species →		TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0030008
all species →		Cellular ComponentTRAPP complexInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20303TRAPPC4, TRS23; trafficking protein particle complex subunit 4-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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