Detailed information of Ppa0G274560 in Paragorgia papillata

Genomic Location: Contig00424:4573513...4583528
NR annotation: CAB3996708.1, delta B [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28858Versican core protein (Fragments) OS=Macaca nemestrina OX=9545 GN=VCAN PE=2 SV=1
P81282Versican core protein OS=Bos taurus OX=9913 GN=VCAN PE=1 SV=2
P13611Versican core protein OS=Homo sapiens OX=9606 GN=VCAN PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan

TOP