Detailed information of Ppa0G286370 in Paragorgia papillata

Genomic Location: Contig00431:1730965...1736598
NR annotation: CAB4021111.1, ribosomal RNA-processing 7 homolog A-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RA17Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii OX=9601 GN=RRP7A PE=2 SV=1
Q9Y3A4Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens OX=9606 GN=RRP7A PE=1 SV=2
Q9D1C9Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus OX=10090 GN=Rrp7a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006344 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17799
all species →		RRM_Rrp7Rrp7 RRM-like N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR034890
all species →		DomainRrp7A, RNA recognition motifInterproscan
IPR040446
all species →		FamilyRibosomal RNA-processing protein 7Interproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR040447
all species →		DomainRrp7, RRM-like N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13191
all species →		RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0000028
all species →		Biological Processribosomal small subunit assemblyInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0032545
all species →		Cellular ComponentCURI complexInterproscan
GO:0034456
all species →		Cellular ComponentUTP-C complexInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G286370.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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