Gene detail

Detailed information of Ppa0G287560 in Paragorgia papillata

Genomic Location: Contig00432:1650825...1691552
NR annotation: XP_028395482.1, exportin-6-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G287560

ATGGCATCAGATGCTGCATCTCTTCAAGGTCTTGAAGTGATTATGAATGAGTTTTTTGCCACAACTAGCAATGAAAGGAAAAGAGAAATAGAAATCTTGCTTCACAACTTTAGCCAACAGCTTGGTGCATGGCGATCTTGCGCTTTCTTTCTAAATAACTCTGAAAACCATTATGTCTTGATGTATTCTTTGTCTGTCTTTGAGGTGCTTCAACAACCAGCAACCACAAGTCTTGGTCTCGTCATGGTCAGAATAACCTCAGAAGAGCTGGTCTCTTCTTCTGAAGATCTTAGTGTGCAACGAAAAGAAGAACTACGTAAATTATTATTACTTCAAGTGCCGGGACTATTGACTATGTTAGGGACATTTCTCGAAAACATTCTGGAGAAACACAGGAAAATTGTGAGCACGGCAACACCGCCTCCTTCGCCCACTCACGGAGAGTCTTCATCACAAAGTGCGTCTCCTCGAGGCGAAACAGAACTCGATTTATTCTCATTGTCTCCTCCTCATAGCAATAACAATAGACATTCGCCTTTAATTGGTCGCTTACTTAATCACAATAGCAAGACACATAACAGTTTAGGCAACCCTTTGCCGCCGTTGGACCCAGATTCGGAAGAACTTAGTTCACTGGCTCTTTCTTGTCTAGCACATCTTTTTAGTTGGATTCCGTTGTCGACCAGCATCACGCCATCTCTCCTGGCAACAGTGTTTTGCTTTGCAGAATTCGGTTGTGATGTTTTAGCCTTGGAGTCTGGAATGATTACTGCAGGTAGCACACGATTGGGCGTCTTAGCAATGGATTGTGTAAACGAAATTTTATCCAAAAACTGTGTCCCCGCCGAATTTGAAGAATTTTTATTGAGACTTTTTCAACAGACGTTTCACCTCTTACAGCGAATCACCAAAGACTCTGGATTACAAACTATCGACCAAAAAATATTAGAACTTGACGAAAGGTATATAGAAAAGTTTACGGAATTCCTAAGGCTGTTTGTGAGCGTTCATCTGAGGAGAGTTGAGTCAAATTCTCATTTCCCAGTCATCGAGTTCATGTCACTGTTGCTGAAATACACCACGAAACAGCCGGACCACGAGGTCTTCTATTCATGTCTTGATATTTGGATGATTTTTCTCGACTATTTAAGTTCGAAAATGTTAGAAACCAAAGAGAGCCGTAGTGCTGAAACTCATCCAGCCGTACAAAGGTATCGAGATGTCCTGGTAGTGTTACTGACAGAGATTTTAAAGAAAGTTCAGTTCACGTATAACCAAAGTGAACTGGAGGAGTTAGATAATGAGACGTTAAATGATGACTCCGAAACCGAATGGCAGCGATTTTTACGTCATTCCCAAGAAGTGGTTGCAAAAATTTCGGAGCTGCTTCCAACTGATGCATTTTCAATACTGTTTCCACTTTTCATGGAATATTCTGAGGTATTTCTTGGATTGCGAGCGGCCATGTTCAAGACAGCTGAAGGATTTGAGTTGAATGTTAAAGGTGAAAACGAATGTCGGCGTGTCCATTGCACCTTGCGTGATCTAACTACGTGCCAAAGAATCTTTGGCAGACTTGCTGGACACTTTATTGGGGAAATGCACTTCCAATCTCGATTTGATGACGGCCTCGCTGTTGTGAAAAGGTATTTTGTTTATGTTACCTTGGTTACACTTCGCCATCACCATTTCTACCTCCAACGCCACACCAACAGGTTTTTAACTGTAGTAATAATTACTGTTCAACTAATGCTTTCTTTAGCTGCAGGTACGTTAGCAGCCTTACAAGTCTACTGCCATTGGCTTTCTCAACTCCACCTTCACTCGAAGCTACATAAACAATACGAAAACGAGTTTGTTCGCATTGTGTCCAGTTGTGTTGACGCCACGATACCATTGCTAAATGAACAGGTTCCCGAGCGAGTGTTGCTGCCAGCGTCACATTTCATGGTTTCCTTGACAACCAGCGTTAGACCGTCATTTTTTGTCGCCTTAGAAAACGTTCAAAAATTATACCACGAAGTGACGGCCGGAAAACTTCGAAGGACTCCCGTAGAGATCGAGACACTGATTTACAGAGCATTATCGAACGCCCTTGTCCTACCTTGGCCAAGCCAGCCTGACGACAAACAAGAATGGCCTTCCCGAAGCACCAACCACGACAACTTGGTGAAAGCTCTGACCATTCATTATCAGCAAATGGTGGAACACACGAACGTGCCTGACAACAAACGTTTTCATGTCGAAGCCAAGAGTTTCATTCGTCGCACATTAGCCATCCTGAAAGATCTGGTGGAAGCTGTAGCTAGTGAGGCAACCAAATCCAAGACAATCATTTACAAGTCGATCCAAGAATCATTGCACACCACGTTGACTTTATTTCCTATCTACATCCACGAACCTGATGTCATCGATTCCATCCTCGGTTTCTTGCTGGCAGTTTTTGGTTCTTTACAAGTGCAGCTTGGAGTTGCGTACACGGAGCAAATTATTCACCGGCTTTTGGGAATGTTTACTCAAGAACAACTGAAAGAGACAATTTTACAAGAAACGTCAGCTGGTTCGAGAGTTCTTGAAAAGTTTCTTCGAATTCTCAGACTCCTAGCACAGCAACCAGGCTCAGCATTCAAAACACTGCTTCCAAATATAATTAACTTCTGTCTTGATCAAATATATCCACTTATCGCAGAGCGATCAGCTCCAGACATTAAAACCGAGTTCTTCGAACTACTTCATCAACTTTTACTGAACAACTGGAGGTATTTCTTCCGATCAAATATCCAAACGCGAGTTACCTTAGGAGAAGATGGAACATGCGAAAATCAAGGACAGTTTGTGAAAATGATGGAGGCCTTTGGGCAGACTTTTACTCAAACAGATATTACAGTGTTCAAACAAAATCTGGAAAGCCTTGAAGATTTGAATTCAAAGTGCAAGCTTTACCAAAAACCAATATTTAGCAATGGAATGTTATTTCATTTCCTCAACGTTCTTTTTCAAGTCTTGGTTCGACGATCACATGATCTCTTGCAAGAAGAGATTGCCATCGCCTTGTACAACATGGCGTCCGCGGACTTTGATAAATTTTATCTTCGGTTTCTTCCCGAGTTCTTGGCGGCCTGCGACGGAATAATTGCAGAACAGAAATCAGAACTATCGAAGACATTTAAAATGGACAAGGATCTACCGTCATTCACCCGTGGCGTCCATCGCTTTGTTAGTGATGTACGCTACTACAGATTATACAACAGCAGTCTACCATCTGGAACAGTAACATTCTAA

Transcript

Ppa0G287560

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96QU8	Exportin-6 OS=Homo sapiens OX=9606 GN=XPO6 PE=1 SV=1
Q924Z6	Exportin-6 OS=Mus musculus OX=10090 GN=Xpo6 PE=1 SV=2
Q53I77	Exportin-6-A OS=Xenopus laevis OX=8355 GN=xpo6-a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005441 (this species only)

Pfam domain

No Pfam domain signature was detected for Ppa0G287560. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR040016 all species →	Family	Exportin-6	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21452 all species →	EXPORTIN-6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005049 all species →	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25204	XPO6, RANBP20; exportin-6	-	Nucleocytoplasmic transport	ko03013	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.