Gene detail

Detailed information of Ppa0G287800 in Paragorgia papillata

Genomic Location: Contig00433:27248...31406
NR annotation: XP_046856515.1, centromere protein X-like [Xenia sp. Carnegie-2017]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0DJH7	Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1
A8MT69	Centromere protein X OS=Homo sapiens OX=9606 GN=CENPX PE=1 SV=1
Q5RBU1	Centromere protein X OS=Pongo abelii OX=9601 GN=CENPX PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011444 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09415 all species →	CENP-X	CENP-S associating Centromere protein X	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009072 all species →	Homologous_superfamily	Histone-fold	Interproscan
IPR018552 all species →	Family	Centromere protein X	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28680 all species →	CENTROMERE PROTEIN X	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046982 all species →	Molecular Function	protein heterodimerization activity	Interproscan
GO:0000712 all species →	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0031297 all species →	Biological Process	replication fork processing	Interproscan
GO:0043240 all species →	Cellular Component	Fanconi anaemia nuclear complex	Interproscan
GO:0051382 all species →	Biological Process	kinetochore assembly	Interproscan
GO:0071821 all species →	Cellular Component	FANCM-MHF complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15360	STRA13, CENPX, MHF2; centromere protein X	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.