Gene detail

Detailed information of Ppa0G287910 in Paragorgia papillata

Genomic Location: Contig00433:146302...150764
NR annotation: XP_028395582.1, adenylosuccinate lyase-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P21265	Adenylosuccinate lyase OS=Gallus gallus OX=9031 GN=ADSL PE=2 SV=2
Q8HXY5	Adenylosuccinate lyase OS=Macaca fascicularis OX=9541 GN=ADSL PE=2 SV=1
P30566	Adenylosuccinate lyase OS=Homo sapiens OX=9606 GN=ADSL PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003303 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00206 all species →	Lyase_1	Lyase	Domain	Interproscan
PF10397 all species →	ADSL_C	Adenylosuccinate lyase C-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000362 all species →	Family	Fumarate lyase family	Interproscan
IPR019468 all species →	Domain	Adenylosuccinate lyase C-terminal	Interproscan
IPR022761 all species →	Domain	Fumarate lyase, N-terminal	Interproscan
IPR004769 all species →	Family	Adenylosuccinate lyase	Interproscan
IPR008948 all species →	Homologous_superfamily	L-Aspartase-like	Interproscan
IPR020557 all species →	Conserved_site	Fumarate lyase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43172 all species →	ADENYLOSUCCINATE LYASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004018 all species →	Molecular Function	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	Interproscan
GO:0009152 all species →	Biological Process	purine ribonucleotide biosynthetic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0044208 all species →	Biological Process	'de novo' AMP biosynthetic process	Interproscan
GO:0070626 all species →	Molecular Function	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01756	purB, ADSL; adenylosuccinate lyase	EC:4.3.2.2	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.