Detailed information of Ppa0G292230 in Paragorgia papillata

Genomic Location: Contig00435:1889572...1938729
NR annotation: XP_028400095.1, uncharacterized protein LOC114521039 isoform X38 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010004 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF03160
all species →		Calx-betaCalx-beta domainDomainInterproscan
PF00092
all species →		VWAvon Willebrand factor type A domainDomainInterproscan
PF12947
all species →		EGF_3EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR038081
all species →		Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR009017
all species →		Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR006150
all species →		RepeatCysteine-rich repeatInterproscan
IPR051146
all species →		FamilyPhosphatidylserine Receptors and Protein Disulfide IsomerasesInterproscan
IPR003644
all species →		DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR024731
all species →		DomainEGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24038
all species →		STABILINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007154
all species →		Biological Processcell communicationInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G292230.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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