Genomic Location: Contig00435:4276378...4308422
NR annotation: XP_028399538.1, integrin beta-1-A-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G293340 |
| Transcript |
| Ppa0G293340 |
| Protein |
| Ppa0G293340 |
| UniProt accession | Description |
|---|---|
| Q27874 | Integrin beta pat-3 OS=Caenorhabditis elegans OX=6239 GN=pat-3 PE=1 SV=1 |
| P05107 | Integrin beta-2 OS=Homo sapiens OX=9606 GN=ITGB2 PE=1 SV=3 |
| P53714 | Integrin beta-2 OS=Sus scrofa OX=9823 GN=ITGB2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000809 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18372 all species → | I-EGF_1 | Integrin beta epidermal growth factor like domain 1 | Domain | Interproscan |
| PF08725 all species → | Integrin_b_cyt | Integrin beta cytoplasmic domain | Domain | Interproscan |
| PF07974 all species → | EGF_2 | EGF-like domain | Domain | Interproscan |
| PF07965 all species → | Integrin_B_tail | Integrin beta tail domain | Domain | Interproscan |
| PF00362 all species → | Integrin_beta | Integrin beta chain VWA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR040622 all species → | Domain | Integrin beta, epidermal growth factor-like domain 1 | Interproscan |
| IPR002369 all species → | Domain | Integrin beta subunit, VWA domain | Interproscan |
| IPR014836 all species → | Domain | Integrin beta subunit, cytoplasmic domain | Interproscan |
| IPR032695 all species → | Homologous_superfamily | Integrin domain superfamily | Interproscan |
| IPR015812 all species → | Family | Integrin beta subunit | Interproscan |
| IPR013111 all species → | Domain | EGF-like domain, extracellular | Interproscan |
| IPR012896 all species → | Domain | Integrin beta subunit, tail | Interproscan |
| IPR036349 all species → | Homologous_superfamily | Integrin beta tail domain superfamily | Interproscan |
| IPR036465 all species → | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10082 all species → | INTEGRIN BETA SUBUNIT | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005178 all species → | Molecular Function | integrin binding | Interproscan |
| GO:0005925 all species → | Cellular Component | focal adhesion | Interproscan |
| GO:0007160 all species → | Biological Process | cell-matrix adhesion | Interproscan |
| GO:0007229 all species → | Biological Process | integrin-mediated signaling pathway | Interproscan |
| GO:0008305 all species → | Cellular Component | integrin complex | Interproscan |
| GO:0009986 all species → | Cellular Component | cell surface | Interproscan |
| GO:0016477 all species → | Biological Process | cell migration | Interproscan |
| GO:0033627 all species → | Biological Process | cell adhesion mediated by integrin | Interproscan |
Ppa0G293340.
