Detailed information of Ppa0G293340 in Paragorgia papillata

Genomic Location: Contig00435:4276378...4308422
NR annotation: XP_028399538.1, integrin beta-1-A-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q27874Integrin beta pat-3 OS=Caenorhabditis elegans OX=6239 GN=pat-3 PE=1 SV=1
P05107Integrin beta-2 OS=Homo sapiens OX=9606 GN=ITGB2 PE=1 SV=3
P53714Integrin beta-2 OS=Sus scrofa OX=9823 GN=ITGB2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18372I-EGF_1Integrin beta epidermal growth factor like domain 1DomainInterproscan
PF08725Integrin_b_cytIntegrin beta cytoplasmic domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF07965Integrin_B_tailIntegrin beta tail domainDomainInterproscan
PF00362Integrin_betaIntegrin beta chain VWA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040622DomainIntegrin beta, epidermal growth factor-like domain 1Interproscan
IPR002369DomainIntegrin beta subunit, VWA domainInterproscan
IPR014836DomainIntegrin beta subunit, cytoplasmic domainInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR015812FamilyIntegrin beta subunitInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR012896DomainIntegrin beta subunit, tailInterproscan
IPR036349Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10082INTEGRIN BETA SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan

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