Gene detail

Detailed information of Ppa0G293400 in Paragorgia papillata

Genomic Location: Contig00435:4393088...4409754
NR annotation: XP_028399439.1, integral membrane protein GPR155-like [Dendronephthya gigantea]
Species abbreviation PPAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G293400

ATGGAGTCATATATAAACAACAGCAACCGTTCTTCTTACAATGATACGTCTTTGGATGATTCATTCGACAATCTGTACCCAGCTTTGATAGAGTGCTTTGGTATAATTATCTTGGGCTACATAACTGGACGTTTAGGGAGCATTTCTACAACAGAAGCCAAAGGACTAAGTAAATTTGCCATTAATACAGGTTTACCTGCGTTTATATTTCGAGCCATTGTCACTCTTGACTTCTCCCGCATAACTTGGATGTTTGTGTTTGTTGTAACACTTGCCAAACTGTTACTTTTTGCTGGGGTGGCCATACTAACATTGCTTTTTACAAGGGATATTGGAAAAGCTGGTCTTTATGGACTGTTTTGTACTATGTCTAATGATCTTGCTATGGGGATACCACTTTTGAAAGCAATGTACGAAGACTCGCATGAAGAATTTATATATTGTATATACTTTCTGGTTCTTGTGTCATTAGTAGTGTTTTTGCCTTTGGCACTTTTAATGATGGAATTCAGCAAACATCGATCTGAGCATACTACATCCAGTTTTGGCCATGCAATGCTAAAAACACTAAAAGCTGTCATCATAAATCCTGTTGTTCTTGGCTCAATTTTTGGCATTCCTTTCAACTTTATTTTGAATCAAGATATTCCAAGAGCTTTGGACAAGTTTCTTGAAACATTGAGCAATGCCTTTCCAGCGGCAGCGTTGTTTTATTTAGGATTAAGTGTTGTTGGTAAAATCAAGGCACAGATTGGTATGGTAATTCTTGTTCCACTCTCACTTACTGCGGCAAAAGTCCTTATTTTGCCTTTGATGGTACGTGGTTTGCTCACGTCATTTACTGTTGGAGGTAGCAAGATGAATGAACAGTGGAGTATCTTTGGTTTTATTTATGGATCAATACCCACAGCTCCTACCGTAGTTATGTATGCAGGTGCATGTGGCATGCAGGAAGACATGGTGGCTTCTGGAATGGTAATGGCAACCTTATTCTCGGCTCCTGTCATGTTCAGCTCCTCTAAGATGGCGTCTGTTCATAATATGAATTACACATATATCGAATACAAAAGCACCCTTGTAAACACAAGAAATGATATAAGCTTTGTAGCAATTGCTATGGCATGCTGGGTAATCATTACCTTGTTGCTCAGTCGTCGTTACAAAGTTGCTCCTCATAATCACACAATATGGCTTGCAACAACACAGTTATGTCTTTGCATATCGTTTGTTTTAACCAAGTCGCAGTCTTTCATTGACAATTGTAAAAGATTGGAATGCTTTCTCGTTACGACATTTCTCCTAGCAACACATTGCCGGACTGCATTGTTGGCATTTCATCTTGCTTGTATTCGCTGCTCTCGTAACGTCAACACGTTTTCCAATAAAGTTGGAATGTACTTTTTTGGATTGGGATTTCCTATTTGTTGCAGTGGCATTGTCTTAATAGTTTTAGAATCTCATTGGAAGAACTTTTTGAAAGGAGAATTGGATTTTATTCATTACTTACAAGAGCAGACTGTTTTTATGGCATTTTGGATTGCCGTCCAATGTATCTGTGTTCTTATTTGTATTGCGTCGTTAGTTTGGGTACACCGCTGTGATGTTTACTCGTGCAAATGTAAGATGACGAAACGACGAAATGGAATTAATGAGGAAACCCCTTTATTGACTGATGAACAGAGGTTATGTTTTATCAGATTTAAAACCACGAGAGCGCAGCCCGAGTGCTTTAGATCTGATAAAACACGTGATGCGAGTGTTTTGAATGGCTTCAAAAACGATTCGTTATTGGATGTTATCGAATCCAACGCGATCAAAAACGAGAAAATGAAGTTAGAAAAATATTACGAAGGAGAGAAACATCAATGTGGACGGCATGTTATTGTGATTATGTGCCATATGTTAGCGATGATTGTATGCATATTTTATGGCATGTGGATTTTGGTCGGAGATAAGGAAAAATCAGGAATATTTTTGGAAGTTGAACTTCTTGTCTCCATCGTACTTTCTGGTCAGGTATGCGTGGTAATCTCATAA

Transcript

Ppa0G293400

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7Z3F1	Lysosomal cholesterol signaling protein OS=Homo sapiens OX=9606 GN=GPR155 PE=1 SV=2
A2AWR3	Lysosomal cholesterol signaling protein OS=Mus musculus OX=10090 GN=Gpr155 PE=2 SV=1
Q5R9A7	Lysosomal cholesterol signaling protein OS=Pongo abelii OX=9601 GN=GPR155 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005762 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03547 all species →	Mem_trans	Membrane transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004776 all species →	Family	Membrane transport PIN-like	Interproscan
IPR051832 all species →	Family	Regulators of mTOR signaling and Rac activation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22829 all species →	DEP DOMAIN PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0023051 all species →	Biological Process	regulation of signaling	Interproscan
GO:0030514 all species →	Biological Process	negative regulation of BMP signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Ppa0G293400.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.