Detailed information of Ppa0G294440 in Paragorgia papillata

Genomic Location: Contig00435:6076518...6083003
NR annotation: XP_028398853.1, uncharacterized protein LOC114522379 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O15151Protein Mdm4 OS=Homo sapiens OX=9606 GN=MDM4 PE=1 SV=2
Q2HJ21Protein Mdm4 OS=Bos taurus OX=9913 GN=MDM4 PE=2 SV=1
Q9LFH6Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana OX=3702 GN=LUL2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002261 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051652
all species →		FamilyMDM2/MDM4 and MUL1Interproscan
IPR001876
all species →		DomainZinc finger, RanBP2-typeInterproscan
IPR043145
all species →		Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR046349
all species →		Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR000315
all species →		DomainB-box-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12183
all species →		MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G294440.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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