Detailed information of Ppa0G295660 in Paragorgia papillata

Genomic Location: Contig00436:1374608...1403847
NR annotation: CAB3977730.1, ultraviolet-B receptor UVR8-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9FN03Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1
Q15751Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2
Q9VR91Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster OX=7227 GN=HERC2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004818 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16457
all species →		PH_12Pleckstrin homology domainDomainInterproscan
PF00415
all species →		RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408
all species →		RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR001849
all species →		DomainPleckstrin homology domainInterproscan
IPR017455
all species →		DomainZinc finger, FYVE-relatedInterproscan
IPR009091
all species →		Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR051709
all species →		FamilyUbiquitin ligases and GTPase regulatorsInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45622
all species →		UBIQUITIN-PROTEIN LIGASE E3A-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G295660.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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