Gene detail

Detailed information of Ppa0G296200 in Paragorgia papillata

Genomic Location: Contig00436:2481196...2488212
NR annotation: CAB3995516.1, peptidyl-prolyl cis-trans isomerase-like 4 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8WUA2	Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens OX=9606 GN=PPIL4 PE=1 SV=1
Q9CXG3	Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus OX=10090 GN=Ppil4 PE=1 SV=2
Q4IE79	Peptidyl-prolyl cis-trans isomerase-like 4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=CYP6 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR051183	Family	U1 snRNP 70 kDa and U11/U12 snRNP 35 kDa	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13952	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0017069	Molecular Function	snRNA binding	Interproscan
GO:0071011	Cellular Component	precatalytic spliceosome	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan