Detailed information of Ppa0G296650 in Paragorgia papillata

Genomic Location: Contig00437:398263...432866
NR annotation: XP_028404583.1, ubiquitin carboxyl-terminal hydrolase 19-like isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B2GUZ1Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus OX=10116 GN=Usp4 PE=1 SV=1
P35123Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus OX=10090 GN=Usp4 PE=1 SV=3
Q5RCD3Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii OX=9601 GN=USP4 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04969CSCS domainDomainInterproscan
PF01753zf-MYNDMYND fingerDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR007052DomainCS domainInterproscan
IPR008978Homologous_superfamilyHSP20-like chaperoneInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

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