Gene detail

Detailed information of Ppa0G296950 in Paragorgia papillata

Genomic Location: Contig00437:942674...951116
NR annotation: XP_028406369.1, 39S ribosomal protein L41, mitochondrial-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CQN7	Large ribosomal subunit protein mL41 OS=Mus musculus OX=10090 GN=Mrpl41 PE=1 SV=1
Q5BJX1	Large ribosomal subunit protein mL41 OS=Rattus norvegicus OX=10116 GN=Mrpl41 PE=1 SV=1
Q6DJI4	Large ribosomal subunit protein mL41A OS=Xenopus laevis OX=8355 GN=mrpl41-a PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009456 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09809 all species →	MRP-L27	Mitochondrial ribosomal protein L27	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019189 all species →	Family	Large ribosomal subunit protein mL41	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21338 all species →	MITOCHONDRIAL RIBOSOMAL PROTEIN L41	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17422	MRPL41; large subunit ribosomal protein L41	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.