Detailed information of Ppa0G300840 in Paragorgia papillata

Genomic Location: Contig00438:3956634...3998836
NR annotation: XP_028404332.1, histone deacetylase complex subunit SAP130-like isoform X2 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5F3U0Histone deacetylase complex subunit SAP130 OS=Gallus gallus OX=9031 GN=SAP130 PE=2 SV=1
Q9H0E3Histone deacetylase complex subunit SAP130 OS=Homo sapiens OX=9606 GN=SAP130 PE=1 SV=1
Q8BIH0Histone deacetylase complex subunit SAP130 OS=Mus musculus OX=10090 GN=Sap130 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004887 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16014
all species →		SAP130_CHistone deacetylase complex subunit SAP130 C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031963
all species →		DomainHistone deacetylase complex subunit SAP130, C-terminal domainInterproscan
IPR024137
all species →		FamilyHistone deacetylase complex subunit SAP130Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13497
all species →		HISTONE DEACETYLASE COMPLEX SUBUNIT SAP130Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070822
all species →		Cellular ComponentSin3-type complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G300840.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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