Gene detail

Detailed information of Ppa0G301210 in Paragorgia papillata

Genomic Location: Contig00438:4756399...4761492
NR annotation: XP_028402933.1, paired box protein Pax-6-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O73917	Paired box protein Pax-6 OS=Oryzias latipes OX=8090 GN=pax6 PE=2 SV=1
P26630	Paired box protein Pax-6 OS=Danio rerio OX=7955 GN=pax6a PE=2 SV=1
Q1LZF1	Paired box protein Pax-6 OS=Bos taurus OX=9913 GN=PAX6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00292	PAX	'Paired box' domain	Domain	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR043565	Family	PAX family	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR001523	Domain	Paired domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45636	PAIRED BOX PROTEIN PAX-6-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0048856	Biological Process	anatomical structure development	Interproscan