Gene detail

Detailed information of Ppa0G302880 in Paragorgia papillata

Genomic Location: Contig00438:8335782...8352700
NR annotation: XP_028402164.1, eukaryotic translation initiation factor 4E type 2-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BMB3	Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1
O60573	Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens OX=9606 GN=EIF4E2 PE=1 SV=1
Q22888	Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans OX=6239 GN=ife-4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005595 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01652 all species →	IF4E	Eukaryotic initiation factor 4E	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023398 all species →	Homologous_superfamily	Translation Initiation factor eIF- 4e-like	Interproscan
IPR019770 all species →	Conserved_site	Eukaryotic translation initiation factor 4E (eIF-4E), conserved site	Interproscan
IPR001040 all species →	Family	Translation Initiation factor eIF- 4e	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11960 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0000340 all species →	Molecular Function	RNA 7-methylguanosine cap binding	Interproscan
GO:0016281 all species →	Cellular Component	eukaryotic translation initiation factor 4F complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Ppa0G302880.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.