Gene detail

Detailed information of Ppa0G304060 in Paragorgia papillata

Genomic Location: Contig00439:60762...65224
NR annotation: XP_046861342.1, protein ARV1-like isoform X2 [Xenia sp. Carnegie-2017]
Species abbreviation PPAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H2C2	Protein ARV1 OS=Homo sapiens OX=9606 GN=ARV1 PE=1 SV=1
Q9D0U9	Protein ARV1 OS=Mus musculus OX=10090 GN=Arv1 PE=2 SV=1
Q3SZW3	Protein ARV1 OS=Bos taurus OX=9913 GN=ARV1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011731 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04161 all species →	Arv1	Arv1-like family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007290 all species →	Family	Arv1 protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14467 all species →	ARV1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006665 all species →	Biological Process	sphingolipid metabolic process	Interproscan
GO:0016125 all species →	Biological Process	sterol metabolic process	Interproscan
GO:0032366 all species →	Biological Process	intracellular sterol transport	Interproscan
GO:0032541 all species →	Cellular Component	cortical endoplasmic reticulum	Interproscan
GO:0097036 all species →	Biological Process	regulation of plasma membrane sterol distribution	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21848	ARV1; lipid intermediate transporter	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.