Gene detail

Detailed information of Ppa0G308110 in Paragorgia papillata

Genomic Location: Contig00442:3879738...3889966
NR annotation: CAB4010035.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VBV7	COP9 signalosome complex subunit 8 OS=Mus musculus OX=10090 GN=Cops8 PE=1 SV=1
Q6P4Z9	COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1
Q99627	COP9 signalosome complex subunit 8 OS=Homo sapiens OX=9606 GN=COPS8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007364 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10075 all species →	CSN8_PSD8_EIF3K	CSN8/PSMD8/EIF3K family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033205 all species →	Family	COP9 signalosome, subunit CSN8	Interproscan
IPR033464 all species →	Domain	CSN8/PSMD8/EIF3K	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13339 all species →	COP9 SIGNALOSOME COMPLEX SUBUNIT 8	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000338 all species →	Biological Process	protein deneddylation	Interproscan
GO:0008180 all species →	Cellular Component	COP9 signalosome	Interproscan
GO:0010387 all species →	Biological Process	COP9 signalosome assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12181	COPS8, CSN8; COP9 signalosome complex subunit 8	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.