Detailed information of Ppa0G308180 in Paragorgia papillata

Genomic Location: Contig00442:3996238...4020896
NR annotation: XP_028393448.1, ESF1 homolog [Dendronephthya gigantea]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H501ESF1 homolog OS=Homo sapiens OX=9606 GN=ESF1 PE=1 SV=1
Q76MT4ESF1 homolog OS=Rattus norvegicus OX=10116 GN=Esf1 PE=1 SV=1
Q3V1V3ESF1 homolog OS=Mus musculus OX=10090 GN=Esf1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004031 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08159
all species →
NUC153NUC153 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012580
all species →
DomainNUC153Interproscan
IPR039754
all species →
FamilyPre-rRNA-processing protein Esf1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12202
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0006364
all species →
Biological ProcessrRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G308180.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP