Gene detail

Detailed information of Ppa0G314490 in Paragorgia papillata

Genomic Location: Contig00453:76682...78685
NR annotation: XP_028418333.1, uncharacterized protein K02A2.6-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ppa0G314490

ATGAATGGGGTCTATCACTACTCCGATATCTTCGATACCTTGACGGACGGCGTTAAAGGACAAGCGGATGACTACGATAAGGCCGTCGAAGCACTTACCAGTTACTTTTCACCAAGAAAAAACATTGAATATGAAGTTCATGTGTTTCGTCAAGCAAAGCAAATGAGTGGTGAAACAATAGACATATTTTACACTCGTCTTAGAACCTTGGCCAAAACGTGCGAGTTTGTAGATATTGACCGAGAAGTAAAGACACAAATAATACAAGGCTGCACCTCACAAAGGATACGACGGCGAGCTCTACGTGAAACAACAACTCTTACTCAACTCCTGAACTATGGACGGTCGTTGGAAGTGTCAGAGGCACAAGCCCGTGGAATAGAAATGGATTCGGGACAGGAGTTTGTTAAGACAACAAGGTCGGAAAATCAGCAAGGTCGGAGAGAATCGGGAAAGAATTCGAAGACGAAGGCGAAGCAAAGATGTTATCGTTGTAATGGTAATTATCCACACACTGGCGTATGCCCAGCCAAGGGGAAAATATGTAACTCTTGTGGTAAACAAAATCATTTCGCTGCAGTCTGTAGGTCAAAACAGCGAAGGAAAACAAGTGACATGCCCAGCAACCAAGAAAGAAAACCACGGCAATATTTAGTAAATCGGCTAGAAGTGAAAGGTCGTGGGGAAACGTCTTCTGAAGACATGACGGACGGTGAAGAAGAGTATGTCTTCTCGACGAAGGCAAATGGGGAAATGCCGGAGGGAAAAGATGCAAAACTGGGAACGCACCCAACCGCAACGTTGATAATTGGCAATCAGGACATTGATTTTATCGTGGACACAGGAGCGACTGTAAACCTGATCGAAGAATCGGATTACCTCAAACTTGAAGACACCACTTTAAGAAAATCAACAACGAAGATCTTCCCGTATGACAGCAAAATTCCACTGAAGATTCTTGGTAAGTTTGAAACTGTTGTTGAAGCGCCTAGGAAAATTACTTGTGCAGACTTTTACGTGGTAAAGAAAAGCAGTAAAGCGGGTGGATCCCTGATTTGCTATAAAATGGCACTTGAACTAGGCTTAATCACAATGGTTAATCAAGTACAAGACACGGCCCCGGGTATCCCTCCTGAATCCGAAATCATAAACAAACACAAAGACGTATTCTGTGGGATTGGAACGTTGAAAGATTATCAAGTGAAATTACATGTTGATATGACTGTCAAGCCGATTGCCCAACCTCACCGAAGAATCTCTTTCCATATACGAAAGCAAGTTGAGGTGAAATTGAAAGAGATGGAAGATGATGATATTATTGAAAGTGTTGATGGACCTACTCCGTGGGTATCTCCGATTGTGGTCGTCCCTAAACCGCATAACCCCCAAGAAATACGAATTTGTGTGGACATGCGACAACCGAACAAAGCGATTGGACGTGAACGACATATCTACCCTACTATTGATGACGTCATCGCAGAACTCGGTCAATCTAAAGTGTTTTCTAAATTAGATTTAAACCAGGGTTACCACCAGTTAGAACTGGCCCCAGAGTCGCGGTATATTACAACATTTAGTACTCATGTCGGTTTGAGGCGTTATAAACAACTTAATTTTGGGGTGAGTTCCGCGGCCGAGATATTTCAAGATACAATAAGGAATGTGATTGAGGACGTTCCGGGATCACTTGATATTAGTGACGACATAATCGTCCATGTTTCAACGCAGGCTGAACACGATGAACGCTTAGAAGCCGTTTTGCAGCGATTGCGTAGAAGTAATTTGACACTTAATAAATCCAATTGCGAATTTAACAAGCCTAGCGTAGTATATTTTGGATACGTTTTCTCCAAAGACGGTGTTTCACCTGACCCTAAGAAAGTAGACGTAGTGCAAAATTTTCAAGCTCCCAAATCAGTAAAAGAAGTAAGAAGCTTTCTTGGGTTGGTTAATTATTGTGGGCGGTTTATCCCTGGCCTAGCGGAAAACCTCTACAAGATTTGA

Transcript

Ppa0G314490

Protein

Uniprot

Uniprot term	Description
P0CT41	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1
P0CT35	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan