Detailed information of Ppa0G333920 in Paragorgia papillata

Genomic Location: Contig00485:723716...727400
NR annotation: XP_028398111.1, lamina-associated polypeptide 2, isoforms alpha/zeta-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61029Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4
Q61033Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4
P42167Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens OX=9606 GN=TMPO PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007093 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08198
all species →		ThymopoietinThymopoietin proteinDomainInterproscan
PF03020
all species →		LEMLEM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011015
all species →		Homologous_superfamilyLEM/LEM-like domain superfamilyInterproscan
IPR013146
all species →		DomainLEM-like domainInterproscan
IPR051656
all species →		FamilyLEM domain-containingInterproscan
IPR003887
all species →		DomainLEM domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12019
all species →		LAMINA-ASSOCIATED POLYPEPTIDE THYMOPOIETINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24031TMPO; lamina-associated polypeptide 2-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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