Gene detail

Detailed information of Ppa0G335820 in Paragorgia papillata

Genomic Location: Contig00493:230869...234869
NR annotation: XP_028408076.1, F-box/LRR-repeat protein 5-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q5XGI3	F-box/LRR-repeat protein 5 OS=Xenopus tropicalis OX=8364 GN=fbxl5 PE=2 SV=1
Q6INS1	F-box/LRR-repeat protein 5 OS=Xenopus laevis OX=8355 GN=fbxl5 PE=2 SV=1
Q8C2S5	F-box/LRR-repeat protein 5 OS=Mus musculus OX=10090 GN=Fbxl5 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01814	Hemerythrin	Hemerythrin HHE cation binding domain	Domain	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012312	Domain	Hemerythrin-like	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13318	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0031146	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0055072	Biological Process	obsolete iron ion homeostasis	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10271	FBXL5; F-box and leucine-rich repeat protein 5	-	Ubiquitin system	ko04121	deepkoala