Gene detail

Detailed information of Ppa0G335890 in Paragorgia papillata

Genomic Location: Contig00493:305486...327524
NR annotation: XP_028397986.1, alpha-aminoadipic semialdehyde synthase, mitochondrial-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G335890

ATGTGGCGTGTAAGTAGAACAAAACCGTTCCACCGTTTACCAAAACTGCCTTATCGGACGATTTTTACGTCGCCAACAGCACGAGAAAGTGGAGTGATGGCAATACGAAGAGAGGACATCAACGTTTGGGAAAGAAGGGCACCTATTTCGCCTGCACATGTTAAGGAACTTGTAGATAAGGATATTAAAGTACTGGTACAACCTTCGACGAGAAGAGCTTACACGATGTCTGAATATGAAGACGCTGGAGCTTTTATAAGTGAAGATCTTTCTCCTGCTTCACTTATTTTAGGTGTCAAAGCAGTACCAATCAGTCAGCTCGTACCAGATAGAACTTACGCCTTTTTTTCGCATACTATTAAAGCTCAACCATTAAGCATGGGGTTGTTGGATGCAATGCTAGAGAAGAATATTAGGTTAGTTGATTATGAAAGAATGCTTGATTCCAAAGGACAAAGAGTTGCTGCATTTGGAAAGTTTGCTGGAGTGGCAGGAATGATAAACATTTTACATGGTCTTGGTTTGCGACTTCTGGCACTTGGTCATCATTCACCATTTATGTACCTTGGTGCAACTCATAACTACAAGAACAGTCGTGCTGCCAAGTTGGCCATATTTGAGCTTGGAGAAGATATTGCAATGGGAAAATTACCTGCACATTTTGGACCTCTTTCTTTTGTTTTTACAGGCTCAGGCAATGTATCTCAGGGAGCTCAAGAAATGTTTCAGGAACTGCCACAAATGTACGTACCTCCTCATGAATTACAACATGCCATGGAGAAAGGAGACCACAGGAAACTTATTGCAACAGTTATCAGAAGAGAGGACTATTTGGTTCCGAAATCTGGTGGGAAATTCAATGCTGAAGAGTACGACGCTCACCCTGAGAAATATCGCTCAATATTTGCTGAAAAGATTGCCCCCTACATGTCTGTTTTGGTTAATGGCGTGTACTGGCAACCTGGATTTCCTCGTCTTTTAACCAATGAAAATGTCAAGCAACTGACAAAGATAAAGGCGACTCCAAGTATCAGTGATGGTTGCCCTCCACTGCCTCATCGATTTTTGGCCATCTGTGATATATCAGCAGATATGAATGGTTCATTGGAGTTTATGACAGAATGTACGACCATTGAATATCCATTTGAACTCTATGATCCAGAGAAAAACAAATCAGAGATTGGGATGGCGGGTAATGGTGTTTTGATGTGTTCCATTGATAATCTTCCTGCACAGCTGCCCAGAGAAGCAACTGATTATTTTAGCAAATTATTGCTGCCATGGATACCTGAGATGGTCGCATCTGATGCAAGTTCGTCATTCGAGAGTCAAAACCATTTATCATCCACTGTCAAAGATGCTATCATAACATCCAATGGAAAGCTGACACCCAATTATGAGTATATTTCAGACTTGAGAAAAAGCCAAGAGCCTACCAAACCATTATCTGTGAAAGAACCTGCTACTGCTCCAATTGGGACTAAAGATATTGATATCAAGCATAAAGTTTTGCTTCTTGGGTCTGGTTTGGTTTCTGCTCCTGTAGTGGAGTATTTGATGAGAGATCAGGCCATTCGTTTGACTGTAGCCTCCGCTGAAACTGAAGAAGCAGAAGCTCTCTGTGAAGTATTCGCAAACACGTCATCAGTTTCTATCGATGTTACGTCAGAGAAAGAAAAACTTCGAAATCTAGTGAAAGATCATGAACTTGTTATCAGTTTACTTCCATTCATGTACCATCCTGATGTGGCTAAATTGTGTATTGAATGCAAAGTGAACATGGTGACAGCCAGTTATGTTTCCCCAGTTATGAACGAACTACATCAAAGTGCTGTGGATGCTGGGATCACGATCTTAAACGAAGTCGGATTGGATCCTGGTATTGATCACATGACTGCTATGGAATGCTTCGATGAAGTGAAGGATCATGGGGGAAAGGTCTTGTCGTTTATTTCATATTGTGGAGGTCTTCCGGCCCCAGAAAACGCTGATAATCCACTGAGAATGAAGTTCAGCTGGAGTCCGCGAGGAATCTTGCTGAACACACAGAACGGGGGAAAGTACTTGGAGAATGGAGAAGTTAAAGAAATTCCTCGAGGTCAAATTCTATACAATGTGAAACCAACCGACTGGATTCCAGGTTACAATCTCGAGTGCTATCCAAACCGTGACTCAACAGCTTACAAATATATCTACGGTCTTGACGATGCCCACACTATTATCCGTGGATCATTGAGATACCGTGGTTACGCGAGTGTTTGTATCGGTTTGCAACAGATTGGTCTTCTGAATCCCGAAGAAACCATGCGTTCTCAATCGCCTACATCCTGGAGAAACTATGTGAGTAGTTTGTTGGGATGTTCAAGCAAAGGAGAACTTTACGATAAAGTGTTTAAACTGGTTGGAGAAGATAACTCGCGATTTTTGGCTATCAAACGACTTGGTTTGCTTTCTAAAGATCTTGCCATACCAAAGTCATCATCACTAGACACTCTCAGTGATCATCTTAGCAAAAAACTAGCGTTCCATGAGGATGAAAGAGATTTGGTTTTATTGCGACATGAAGTTGAAATAGATTGGCCAGATAAAGCAAAGGAAACTCGTCGTATTAGCATAATAGCTTACGGTGACTCCAAATACTCTGCTATGGCAAGATGTGTTGGACTGCCAACTGCCATTGGAGCTAAGATGGTACTCGAAGGCAATATGAAGAAAGGCGTTGTCTTGCCAACTGAACGTGAAGTTTATCAACCAATTTTGAAAAGTCTTCACGACGAAGGATTAACAGCAGAAATCCGAGGAAGTGTGGTTTTGCCTCTTGGCCGTTTTGGTTTCGACACCGATCGCTTTTGCGCCATACGTGAAAAGTTGAGTAATACTGAATTAGGACAAATCTTACAGGGGACCCTTGTGGAATGA

Transcript

Ppa0G335890

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8E657	Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Bos taurus OX=9913 GN=AASS PE=2 SV=1
Q99K67	Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Mus musculus OX=10090 GN=Aass PE=1 SV=1
A2VCW9	Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aass PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003890 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05222 all species →	AlaDh_PNT_N	Alanine dehydrogenase/PNT, N-terminal domain	Domain	Interproscan
PF03435 all species →	Sacchrp_dh_NADP	Saccharopine dehydrogenase NADP binding domain	Family	Interproscan
PF16653 all species →	Sacchrp_dh_C	Saccharopine dehydrogenase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007698 all species →	Domain	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR007886 all species →	Domain	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal	Interproscan
IPR005097 all species →	Domain	Saccharopine dehydrogenase, NADP binding domain	Interproscan
IPR032095 all species →	Domain	Saccharopine dehydrogenase-like, C-terminal	Interproscan
IPR051168 all species →	Family	Alpha-aminoadipic semialdehyde synthase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11133 all species →	SACCHAROPINE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004753 all species →	Molecular Function	saccharopine dehydrogenase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0019878 all species →	Biological Process	lysine biosynthetic process via aminoadipic acid	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14157	AASS; alpha-aminoadipic semialdehyde synthase	EC:1.5.1.8 EC:1.5.1.9	Lysine degradation	ko00310	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.