Gene detail

Detailed information of Ppa0G337300 in Paragorgia papillata

Genomic Location: Contig00497:950702...963766
NR annotation: XP_028393732.1, uncharacterized protein LOC114518037 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ppa0G337300

ATGATCCTCCGGCAGTCTCGAGCTGTAAGGCAATTGACACAAATCTTGAATGCGTATATCATGGTTGGGGATTTTACATATTTAGGATATCTGAAACCTTCTGAGAAGATTTGCAGATGTCCTCGAAAACTAAGAACCATGACTGCAAGCAAAGGAACGATAAGCACGTTTGGTTACCCAGCAATCTACAGTCCACGTCAGATTTGCTTGTGGCGTATTATTCCTCCAAGAGGTTACGGCGTCCATTTGGATTTCCATGACAAGTTCGGTATCGACTGCAAGTCAAAAGACAGGGTAGCGGTCAGCTCGAGACCGCTTTTCGCCCGCAAAATGCCAAAAGGTTCGGTGAGCACCGCAATGTTTTGTGGGCTGTCGCGTATACCTAATGTGACCGTTTACGATACAAATATGTGGATTCGGTTCCAGGCCACCAAGGACGGAAAACGAGGAGTTGGCTTCAAAGCTACTTACATATTGTTAGATAATGATGAATGTAAAGAGCGACATCGTTGTGTTCAGAATTGTGTCAACACACCAGGAAGTTTCAGGTGTTCGTGCAACGCAGGATACGAGTTGACAGCTGATGGATATAACTGTACAGTTATTCCAGAATATGAAGTGAAATTTGAGACCGAAGGTTACGAGGTGACTATTTCAGAAGGAATTTCTAAGTACACCACAGTAATGACAGCAAGAGCTTACGCAAATGAGACAAGCAAGCCAATCAAATACAGTTTAACAAGAAGATATCCGAAACCAAACAGAATTGGAAAATATCCTTTTCGCATCTCGACTCACACAGGTGAGATTACAACTCGAAGACGTCTCCCCCCTGATATCTATGAATACAAAATGACAGTGAGAGCAGAGGTTAACAGTGTAAGCTACGCCATGCTCCCAGTCTACGTCAACGTCACTCCAATCACGTCCAACATAAAAAACATCAGTTTCTCGCGTCCACACTACTCTGCAATCATTATCGACAACCTGGAGCAAGGCAAAGTCTTTCTCAGTCTTCCAATTACGCCATCCGCCGCCTCCGATTACGTGATCTATGACATTTCAGGGAAAACCCAGGAGAAGGACGTTCTCGCTACTCAGTATTTCAAGATTGATAAGGGTTTGGGTAACCTGAAAATCAAGCGAGATTTAAACGAACTGAGACTGGGTGCTAGAAATGATTCTGAGAAGTTTGAGTTTACCGTCGTCGCTCGACTCCGGAGCAAGACGATCGTAACAGCTTCGGCGCTTATAACGGTCATCGTTATTCCGGCCTATTCCGGAGATATTTATCCACAACTTGACGAGGAAAAACGAGCTGAGTCACGTAATCTGCCAAAAGTCGAGCACGCCAAAGCGGCAAAATTTCAACCTCATCGCTTCTTTCGGCAACTTTCGCCATTCGCTCGGGATATTTCGAAAGCGGAAAGAAAATTCCAAAAACACATTGAGGACATACGTATCAGAGTGAGAGAAGATTATGTAGGTCAGAGACTGCGAAGTGCTGATAGAAATTTAATCGTATCAAATCTCCCAGCGATATGCTTAGCATCGCATGATAAACTACAAGAACTGATTAATGCCTCACACTGCGTCATCCCGAAATCAGACTGCTCCAATAAGGCCTATCATTCAAGATACAGAACGTTTGATGGCACTTGCAACAATCTGAACCACACATTGTGGGGTGCCGCTAATATGCCTTTCAATCGAATAATCCCATCAAAATACTGGGACAAGGAGGGACGTGGAGAACCAATAGGTTTTCCAGGGCAAGAGAATAGAGCTCCAACGCTGCCCTCGCCTCATCGCATTAGCGAAGAGTATATTATACATAGAGAATGTGGAAAAGCGAGTAACTACTCTCATATGATGATGCAATGGGGACAGTTTCTTGACCATGACATCACATTTACTGGGGAAAGTGACGGCTCCGAACATTGCGATACACCACGTTGTGATGGATCCGAAGAGGACTATGAGTATCCCTGTTATCCCATAATGTACTCTAGTCCGAGCCAGGGATGTACCAGGTTTACGCGGTCAGCGGCAGCTTGCCAGACAGACCCAACAAATATTAAGAATCGAGAACAACTCAACTTGGTAACGTCTTACATAGACGGATCACAGATTTATGGATCGTCAGAAGAGGACGCCAATAGACTTAGAGACTTCGAAGAGGACGGAGGATACCTTCGTATGACGAAAGACCACCTTTTGCCTGACTTGCAAAAAACCCTCAAGCCTCCTAACAACCTGTGCAGCTTCTCGGGTGGTTGTTTTGCTGCAGGCGACCTGCGGGCCAACGAGCTGATGGTACTAGCCTCAATGCACACACTGTGGGTACGAGAGCATAATAGACTGGCGGCCTTCCTGAAAGCCATGAACCCAAGCTGGAACTCAGGGAAATTGTTTCAAGAAGCCAGGATGATAGTGATCGCTGAACTACAGCATATCACGTACAACGAATTCCTTCCCAAGCTCCTTGGTATAGATGCACTGCCAGATTACGGAGGTTATGATGAAAACGTAAACGCAACCGTTTTTAACAGTTTCGCCGCTGCGGCGTTCCGCCTTGGTCATAGTTTGGTCCGTAATTGTTTCGCTCGTCTAGATCATAACTTTGATCCTATAGGCCCAGATATACCATTAAAGAACGCGTTTTTTAATAACACGTTTATTCATGTAGAAGGAATTGAACCATTTCTCCTTGGCTTGCTTGGGAATGGCTCCAAATCAGCGAGTCGTGGAATGGCCGTTGGATTAACGAAGCACTTGTTCCAACAGCCGGGATCTGAACATGGCTTTGATCTCGCCGCGTTAAACATTCAAAGAGGTCGTGATCACGGCTTACCTGGCTACGGGAGCTGGAGACGAACGTGTAACCTAGAAGAGGCCACGTTCTTCAACGAAACTCAGTCCGAGATTAAGAGTTCAGAAGCGCGAGATATTCTGAGTAAGCTTTATGATGGGAGGACTGAAGATGCGGATTTATGGGCGACAGGTCTAGCTGAAGATCCTGTTTCTGGAGCTATGATGGGACCAACGTTTCGTTGTATCCTTAGTTGGCAATTTACTCGACTAAGAAACGGTGATAGGTTCTGGTATGAAAATCCCGGTGTGTTTACACCAGAGCAGTTGACGGAAATCAAGAAAGTTACTTTGTCAAGAGTGATCTGTGATAATGCGTACGGTGTTGTTTCTGTGCAGAAAGACGCTTTCTTGACGGCGACCAATGATAGTCAAAGAGTCGAGTGCATATTCGGTTTGCCAGCCATGCATATGAACGTTTGGAAAGAGGGTTCTGGTATGAAAATCCCGGTGTGTTTACACCAGAGCAGTTGA

Transcript

Ppa0G337300

Protein

Uniprot

Uniprot term	Description
Q92626	Peroxidasin homolog OS=Homo sapiens OX=9606 GN=PXDN PE=1 SV=2
Q3UQ28	Peroxidasin homolog OS=Mus musculus OX=10090 GN=Pxdn PE=1 SV=2
A4IGL7	Peroxidasin OS=Xenopus tropicalis OX=8364 GN=pxdn PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03098	An_peroxidase	Animal haem peroxidase	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019791	Family	Haem peroxidase, animal-type	Interproscan
IPR000859	Domain	CUB domain	Interproscan
IPR019793	Binding_site	Peroxidases heam-ligand binding site	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR002126	Domain	Cadherin-like	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR010255	Homologous_superfamily	Haem peroxidase superfamily	Interproscan
IPR050702	Family	Peroxidase Activity and Reactive Species Generation	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR037120	Homologous_superfamily	Haem peroxidase domain superfamily, animal type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11475	OXIDASE/PEROXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004601	Molecular Function	peroxidase activity	Interproscan
GO:0006979	Biological Process	response to oxidative stress	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan