Detailed information of Ppa0G340340 in Paragorgia papillata

Genomic Location: Contig00499:59740...72193
NR annotation: CAB4019939.1, MAM and LDL-receptor class A domain-containing 1-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1LW01Hatching enzyme 1.2 OS=Danio rerio OX=7955 GN=he1.2 PE=1 SV=1
Q20191Zinc metalloproteinase nas-13 OS=Caenorhabditis elegans OX=6239 GN=nas-13 PE=2 SV=5
Q61847Meprin A subunit beta OS=Mus musculus OX=10090 GN=Mep1b PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01822WSCWSC domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001506DomainPeptidase M12AInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP