Detailed information of Ppa0G340360 in Paragorgia papillata

Genomic Location: Contig00499:91445...105051
NR annotation: CAB4005858.1, dystroglycan-like isoform X1 [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q62165Dystroglycan 1 OS=Mus musculus OX=10090 GN=Dag1 PE=1 SV=4
Q14118Dystroglycan 1 OS=Homo sapiens OX=9606 GN=DAG1 PE=1 SV=2
Q9TSZ6Dystroglycan 1 OS=Canis lupus familiaris OX=9615 GN=DAG1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008632 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05345
all species →
He_PIGPutative Ig domainDomainInterproscan
PF05454
all species →
DAG1Dystroglycan (Dystrophin-associated glycoprotein 1)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008465
all species →
DomainDystroglycan, C-terminalInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR030398
all species →
DomainDG-type SEA domainInterproscan
IPR006644
all species →
DomainDystroglycan-type cadherin-likeInterproscan
IPR027468
all species →
Homologous_superfamilyAlpha-dystroglycan domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21559
all species →
DYSTROGLYCAN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016010
all species →
Cellular Componentdystrophin-associated glycoprotein complexInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0002009
all species →
Biological Processmorphogenesis of an epitheliumInterproscan
GO:0007411
all species →
Biological Processaxon guidanceInterproscan
GO:0016011
all species →
Cellular Componentdystroglycan complexInterproscan
GO:0016203
all species →
Biological Processmuscle attachmentInterproscan
GO:0021675
all species →
Biological Processnerve developmentInterproscan
GO:0042383
all species →
Cellular ComponentsarcolemmaInterproscan
GO:0043236
all species →
Molecular Functionlaminin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G340360.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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