Detailed information of Ppa0G343540 in Paragorgia papillata

Genomic Location: Contig00505:1048066...1066794
NR annotation: XP_046848226.1, synaptotagmin-like protein 4 isoform X3 [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96C24Synaptotagmin-like protein 4 OS=Homo sapiens OX=9606 GN=SYTL4 PE=1 SV=2
Q8TDW5Synaptotagmin-like protein 5 OS=Homo sapiens OX=9606 GN=SYTL5 PE=1 SV=1
Q812E4Synaptotagmin-like protein 5 OS=Rattus norvegicus OX=10116 GN=Sytl5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02318FYVE_2FYVE-type zinc fingerFamilyInterproscan
PF00168C2C2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041282DomainFYVE-type zinc fingerInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR043567DomainSynaptotagmin-like 1-5, C2B domainInterproscan
IPR000008DomainC2 domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001565DomainSynaptotagminInterproscan
IPR010911DomainRab-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45716BITESIZE, ISOFORM IInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0042043Molecular Functionneurexin family protein bindingInterproscan
GO:0070382Cellular Componentexocytic vesicleInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19938RPH3A; rabphilin-3A-Membrane traffickingko04131deepkoala

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