Gene detail

Detailed information of Ppa0G353430 in Paragorgia papillata

Genomic Location: Contig00515:1040297...1042528
NR annotation: CAB4017817.1, zinc finger MYM-type 1-like [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ppa0G353430

ATGACTACAATAACATCAGAGTCAGACTCAGAGTCAGACGGCTTTGAATCTGAGCTTGCCAATCAAGATGAACCAACGGGAAAACCTGTAACTAAGTCTAAGAAGAAGAAGTACGAGCAAAAATTTTTAAATTCCTGGCTGACTGAATTCAAATACTGGCTTGAAAAGCGGGATGGTGCTCCCTACTGCAAACTATGTAATTGCTCGCTATCATGCGCCAAGACGGCCATAAAACGACATATGGAAAACAAGAAACACAAGAACTTGTGTAAAATAAAAGAGCAGGTAAATGCGCCTATACACTCTATGTTAGGGACACGAGCAAATCCAGCAAGGATCGAGATAAAACTTTGTTCATTTATAGCAGAGAAAGACCTTCCAATCAGCATTGTGGAAGATCTTGTGCCCCTTCTACGAAATCTTGTTCCTACCGATTCAGCTCTCCGCGAAGTTAAGCTAGGGAAACAAAAGGCCACCAATATAATCCGTCAAGTATTTGGTTTTCATGCCATGAAAGAAGGTGTCTATAAACTTAAAGAGAACAAGTTCTCATTGATTTTGGACGAAACAACAGATAAGTCAACAACGTCACAGCTTGCCATACTCGGAGTCTATTTTAACAAACAAACATTTAGACTTGAAATAATTGTAATTGATCTTGTACCAATGTCAGATGGAGCTGCTGCGACGATCTACAAGGCCCTGCTAGACAGTCTAAAAGAAAGAGGCATTCCAATGAAAAATGTAATTGGTTTCTGTGCTGATACCTGCAATGTGATGTTTGGTGTCAATCATTCAGTTGCCCAGATGCTCGTCAAGGATCATCCGTGGATTATACCCATTAAATGTTCCTGTCATTTGATTCATCTTTGCAGTTCGCATGCAGCAAAGGTTTTCCCTAAAGCTGTGGAAGATATGTGCAGGAACATCTTTTCTCATTTCAGCATGTCCAGTAAAAGGTCTGAGGCATTCAAAGAGTTCCAGGAGTTTCTTGATTCGAAAGAGCTGAAAATCATGCGTCCAGGTTATACTCGATGGTTATCTATGAAATCATGTGTGAAGAGAATCCTTGAGCAGTATACAGCCTTACAGCTTTACTTTACCAGTGTTGCAGTTGAAGATCCTACACATACGAACGATGCAATTCTCGCAAGTTTAAACAACAAGTTCTTTGAAGTCTACCTGGAGTTTATGGATTTCAACTTAGGTAGGCTCGTTTCGTTTAATCTGCTTTTCCAAAGTGAAATGCCACAGCTCCACCAGTTGAAAGGGGAAGTAGACAACCTTATCAAAGCCATGTGTTCTGATTTTATGGATATTGCCCCATCCAGAAAAGACAAGCATTGTCCTCTGGATAAAGTTTATCTTGGCATTCTGGCAACAGATACTATGTATACCATCAAGGAAGAGCGTGGCAATGAAGATCCAGATATTGCACTTGTTTATTCCCAGTGCCAGCAGTTCTTGATTGAGGCTGTGCAGCAAATCCAATCTCGATTTGGCGATTGCCACAAAGTAGCTGATCTGGTGTCTTGCATTCTGCCAAGTTGTGCCTACAACTTGAAGATTCCTTCATTGAGTGGTTTGTACAGAGAGATGCCTATCCTTAAAGAGGTGGCTGATCTGCAGGAAGTAGATAAGGAATGGAGAGGTCACTCTATGAATCCCAAGTTAAGCGAAGATCTCACCGCAGAAGAGTACTGGCAAGTTGTATTTAAAGAAAAGAAATCGACAAATGAACTTGCCAGACCAAATTTGGTGAAAGTTATCAAAGTCTTGTTGTCCCTGCCATTCTCCAACGCAGCAGTAGAAAGGGTGTTTAGCCATCTTAAATTGATCAAAACAGATCATAGATCTCGTTTAAAACAAGAAAGTTTACTTGCTCTATTAACAACAAAAATGACTCTTTTGAAATCCAACCACTTAAATGTGCCTGCAACTGTAAAGCTTGAACCATCAAGGGATATGCTCAGTCTTCACAAGAATATGGTGACAAATGCTGACAATGATGAGGTTACCCAGATAAGGAAAGATTTCATGAAGGAAATTAATATGGAAGTAATGGAATAA

Transcript

Ppa0G353430

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37162	HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24637	ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1)	EC:2.3.2.-	Ubiquitin system	ko04121	deepkoala