Gene detail

Detailed information of Ppa0G355580 in Paragorgia papillata

Genomic Location: Contig00522:1073309...1076360
NR annotation: CAB3995923.1, Simiate [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q28G67	Protein Abitram OS=Xenopus tropicalis OX=8364 GN=abitram PE=2 SV=1
Q1LU93	Protein Abitram OS=Danio rerio OX=7955 GN=abitram PE=2 SV=1
Q9NX38	Protein Abitram OS=Homo sapiens OX=9606 GN=ABITRAM PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009127 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01597 all species →	GCV_H	Glycine cleavage H-protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039169 all species →	Family	Protein Abitram	Interproscan
IPR011053 all species →	Homologous_superfamily	Single hybrid motif	Interproscan
IPR033753 all species →	Family	Glycine cleavage system H-protein/Simiate	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13651 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02150	ATPeV1E, ATP6E; V-type H+-transporting ATPase subunit E	-	Rheumatoid arthritis	ko05323	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.