Gene detail

Detailed information of Ppa0G357450 in Paragorgia papillata

Genomic Location: Contig00524:704427...707545
NR annotation: CAB3984972.1, D-arabinitol dehydrogenase 1-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8KQL2	D-arabitol-phosphate dehydrogenase OS=Enterococcus avium OX=33945 PE=1 SV=1
A1JHX8	L-threonine 3-dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=tdh PE=3 SV=1
A7FCU5	L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) OX=349747 GN=tdh PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002391 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF08240 all species →	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002328 all species →	Conserved_site	Alcohol dehydrogenase, zinc-type, conserved site	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR050129 all species →	Family	Zinc-containing alcohol dehydrogenase	Interproscan
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR013154 all species →	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43401 all species →	L-THREONINE 3-DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17818	ARD1; D-arabinitol dehydrogenase (NADP+)	EC:1.1.1.287	Pentose and glucuronate interconversions	ko00040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.