Gene detail

Detailed information of Ppa0G362790 in Paragorgia papillata

Genomic Location: Contig00529:2731923...2735033
NR annotation: XP_028408440.1, ATP synthase F(0) complex subunit B1, mitochondrial-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P13619	ATP synthase peripheral stalk subunit b, mitochondrial OS=Bos taurus OX=9913 GN=ATP5PB PE=1 SV=2
P24539	ATP synthase peripheral stalk subunit b, mitochondrial OS=Homo sapiens OX=9606 GN=ATP5PB PE=1 SV=2
Q5RFH9	ATP synthase peripheral stalk subunit b, mitochondrial OS=Pongo abelii OX=9601 GN=ATP5PB PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007462 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05405 all species →	Mt_ATP-synt_B	Mitochondrial ATP synthase B chain precursor (ATP-synt_B)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008688 all species →	Family	ATP synthase, F0 complex, subunit B/MI25	Interproscan
IPR013837 all species →	Family	ATP synthase, F0 complex, subunit B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12733 all species →	MITOCHONDRIAL ATP SYNTHASE B CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000276 all species →	Cellular Component	obsolete mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	Interproscan
GO:0015078 all species →	Molecular Function	proton transmembrane transporter activity	Interproscan
GO:0015986 all species →	Biological Process	proton motive force-driven ATP synthesis	Interproscan
GO:0046933 all species →	Molecular Function	proton-transporting ATP synthase activity, rotational mechanism	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02127	ATPeF0B, ATP5F1, ATP4; F-type H+-transporting ATPase subunit b	-	Diabetic cardiomyopathy	ko05415	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.