Gene detail

Detailed information of Ppa0G363110 in Paragorgia papillata

Genomic Location: Contig00529:3551129...3569051
NR annotation: XP_028414208.1, exostosin-2-like isoform X2 [Dendronephthya gigantea]
Species abbreviation PPAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G363110

ATGAACTTTAAACACAGATGGCTGTACTTGCTCGCCTTTCTCTTAGGATTAGCTGTTTTGGTGACTTTTTTAAGATTAAAAAACGGAAAAGCTTCAGGCCCGGAGGAAAGCGATGGAGAAGATGTCTTATCTCAAACTATTCCCTTCAACATTCCATCATCTTCGCCGTCGTTTGAACGTTGTCGGATGCATACCAATGAATGTTTTAATATCTATCGTTGTGGTTATAACGAAGAGAGTAAAATAAGTGTCTACGTGTATCCGTTTACGAACTACTTCGATGAAAATGGGGATCAACTATCTCCATCCTTTTCGCGTGAGTTTTACGAATTCATGACAGCGTTGAGAAGAAGTAGTTATTATACACCGAATATGGACAATGCTTGTATTATAGTTCCCCCAATCGACACTCTGAATCAAAGACGGATTGATTTGAACAATGCAGGAAGAATCCTGAGTAGTTTGGCAAGTTGGAAAAAACTTGAAGGCAAAAACCATCTAATATTCAACATGCTTCCTGGTCAAGAACCTGACTTCAACACAACCTTGGATGTTCATACTGATAGAGCAATTCTAGCTGGTGGTAGTTTCTCAACATGGACGTATCGTCCAGGATTTGATATCAGTATACCTGTCTTTAATTCATTAACATTTGATTCACGCCTTCACCAGGTCTCAAGGCCTGTAAACAAACAATGGTTCTTGTTGTCTTCACAAGTTAACTACAACACTGATTTTCGTACATCTCTTGAAATCCTTGCCACTTCTAAATCTGATGTAATGATTCTTAATCGCTGTCTAAAAGATGATCAATTGTTTACACGTTGTGATGGCAAAACACTTTTTAAATACCCTCAAATTCTCGAGCTTAGTACTTTTTGTGTCACTATTCGAGGGGCCAGGTTAGGCCAGTCAACACTAATGGATGCCCTAATGATGGGTTGCATTCCAGTTATTGTAGCTGACAGTTACGTTTTGCCTTTCTCTGAAGTTATTGACTGGAAAAGGGCAGCAGTGGTCATTCGAGAAGAACAAATTTCAGATGTATATAAAATCCTCAAGACGTTTACTTCTCAAGAGATAGCTGACATGACCAAACAGGTCAGTCATCTGTGGACGAATTATTTCAGTTCAATGAAAAAGATTGGCCTAACTACGTTGAAAATTCTCAATGACCGAGTGTTTCCCAATTCCGGTTGGTCATACGAGGACTGGAACACTCCAAACATCCCGTCTTCAAGCCGTTCCAGGGAGATTATCCATTCACCTTTCATTGTGCCGTTAATGTCTTCAAAACGAAAGGGGTTCACAGCCGTTGTCCTTACGTACGACCGTGTTCCGATGCTCTTTCGTGTTCTCAAGCAAGTTGACAGAGCTCCGAGTCTTGCCAAGATTGTGGTCGTGTGGAATAATCTTGACAAACGTCCTCCTCCAGTTTCGGAGTGGCCTAAACTTACAAAGCCTGTTGAAGTGATTGAAACAAAAGCCAACAAGCTCAGCAACAGGTTTTACCCTTACAAAGAAATTGAAACGGAGGCCATTTTTTCTCTGGACGATGATATTGTTATGTTAACGGCGGATGAAATTGAGTTTGGCTTTCAAGTTTGGTCTGAATTTCCCGACAGGCTCGTTGGCTTCCCTGGTCGTCTTCATACGTCGAGTAATGTGACAAAAAAGTTGAGGTATGAGTCAGAGTGGGTGAACGAGGTTTCAATGGTACTAACAGGAGCTGCTTTTCACCACAAGTATTTTAGCCATGCGTTTACCTACATGATGCCTGCTAGTTTACGAAACTGGGTGGATAAACATATGAACTGTGAAGATATTGCTATGAATTTCTTGATTGCCAACTACACTGGGAAAGCTCCTATAAAGGTCACCCCAAGGAAGAGATTCAAATGTCCAGAGTGCACAACAACAGAAGCTCTTGACTCAAACCCAGCACACTTCATTGAAAGATCCGCGTGTATCGAGGAATTTGTCAAATTATACGGCACACTGCCGTTGAAGACCGCTGAATTTCGTGCCGACCCTATTCTATTTAAAGACGACATACCATCTCGGGGAAAACGCTATAAAAATATCGGTACCATTTAG

Transcript

Ppa0G363110

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P70428	Exostosin-2 OS=Mus musculus OX=10090 GN=Ext2 PE=1 SV=2
Q93063	Exostosin-2 OS=Homo sapiens OX=9606 GN=EXT2 PE=1 SV=1
O77783	Exostosin-2 OS=Bos taurus OX=9913 GN=EXT2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001759 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09258 all species →	Glyco_transf_64	Glycosyl transferase family 64 domain	Domain	Interproscan
PF03016 all species →	Exostosin	Exostosin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004263 all species →	Family	Exostosin-like	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR015338 all species →	Domain	Glycosyl transferase 64 domain	Interproscan
IPR040911 all species →	Domain	Exostosin, GT47 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48261 all species →	ACETYLGLUCOSAMINYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006486 all species →	Biological Process	protein glycosylation	Interproscan
GO:0016757 all species →	Molecular Function	glycosyltransferase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02367	EXT2; glucuronyl/N-acetylglucosaminyl transferase EXT2	EC:2.4.1.224 EC:2.4.1.225	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.