Gene detail

Detailed information of Ppa0G364310 in Paragorgia papillata

Genomic Location: Contig00531:130026...145452
NR annotation: CAB4001819.1, nicalin-like isoform X3 [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NZ07	BOS complex subunit ncln OS=Danio rerio OX=7955 GN=ncln PE=2 SV=1
Q969V3	BOS complex subunit NCLN OS=Homo sapiens OX=9606 GN=NCLN PE=1 SV=2
A0A8I3NGV2	BOS complex subunit NCLN OS=Canis lupus familiaris OX=9615 GN=NCLN PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005900 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05450 all species →	Nicastrin	Nicastrin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016574 all species →	Family	Nicalin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31826 all species →	NICALIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0009966 all species →	Biological Process	regulation of signal transduction	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26499	NCLN; BOS complex subunit NCLN	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.